Insertion junction: CLIP2.009540_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009540
Chromosome:chromosome 11
Location:3572827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478000 (1 of 18) IPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACACACACACACACGCACGCACACGCACACACACACACACACA
Internal bar code:TTCATCGCACAATCTATACACC

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TATACATACGCACCGTGCCC
Suggested primer 2:TGACAATCAGGGCGCAGATT