Insertion junction: CLIP2.009546_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009546
Chromosome:chromosome 2
Location:4706144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108100 (1 of 1) PTHR12147//PTHR12147:SF22 - FXNA-RELATED // ENDOPLASMIC RETICULUM METALLOPEPTIDASE 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGCGGCCTGCCCATCCTGTTCCAACACACGGGCGCATGGACGGTGGC
Internal bar code:ACCGAGCAACTGGTCGTTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:739
LEAP-Seq percent confirming:72.5
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAGCAGGAGAAAGGGCA
Suggested primer 2:GGAGCTGGGTGAATGGTTCA