Insertion junction: CLIP2.009547_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009547
Chromosome:chromosome 9
Location:165427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386734 (1 of 2) PTHR31646//PTHR31646:SF1 - FAMILY NOT NAMED // ALPHA-1,2-MANNOSYLTRANSFERASE MNN2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAGTCTCATGCTGGCCCCTAGTTGGTGGGCCCCGGTAAAGGCAAGAT
Internal bar code:CCGTGATGCAGGCGAGGGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:960
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGGCAGTGGCAAGTTTC
Suggested primer 2:TATTGACGAGCAGCTGGTGG