Insertion junction: CLIP2.009547_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009547
Chromosome:chromosome 9
Location:165434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386734 (1 of 2) PTHR31646//PTHR31646:SF1 - FAMILY NOT NAMED // ALPHA-1,2-MANNOSYLTRANSFERASE MNN2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACTGCAGGAGATGCCGGCCCCGCTTTTGACTGGGATATATGCCCCCA
Internal bar code:CCGTGATGCAGGCGAGGGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2687
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TATTGACGAGCAGCTGGTGG
Suggested primer 2:CAGTGGCAGTGGCAAGTTTC