Insertion junction: CLIP2.009549_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009549
Chromosome:chromosome 13
Location:2643094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581200 (1 of 1) PTHR12241//PTHR12241:SF1 - TUBULIN TYROSINE LIGASE-RELATED // TUBULIN--TYROSINE LIGASE PBY1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCACCCAGGCCATGCCCACAGCCGGGCGACATTTCTGGCCGTAGCAGG
Internal bar code:GCGAACGTCTTCCCAGGGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3367
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGCCCACGAGCATAACA
Suggested primer 2:AGCTTGCCATCTCCTGTCAC