Insertion junction: CLIP2.009554_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009554
Chromosome:chromosome 3
Location:5359306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183300 (1 of 4) 2.7.9.5 - Phosphoglucan, water dikinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGTGGTGCAGGGCAAGGTCTCACAGGGAAGGAGTGCCTCTTGTTCA
Internal bar code:AGGATACTTTTAAGTATTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:887
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGCCAGCGAAAACGACG
Suggested primer 2:CCGCTCATTCTGCATCGTTG