Insertion junction: CLIP2.009557_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009557
Chromosome:chromosome 9
Location:3456202
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396028 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCGAGGTCGCGAGTACAGCTCTCGGGCCCTAATTTCTTACAACCATG
Internal bar code:TAAATTTGATTTGCCAGGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:573
LEAP-Seq percent confirming:31.5789
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAACGCAAGGAAGGACA
Suggested primer 2:TGACTATAGCTCACCGCCCT