Insertion junction: CLIP2.009558_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009558
Chromosome:chromosome 17
Location:6861130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g747397 (1 of 1) PTHR24362//PTHR24362:SF284 - SERINE/THREONINE-PROTEIN KINASE NEK // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAATATTACCGCATACGGGTCAGCCGCCTGCCCCCTTGGGCCTTGGT
Internal bar code:GTGGCATCGAGTGAGTATAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:514
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGGAGCACTTGGGTAC
Suggested primer 2:CAACGCATATGGCACCATGG