Insertion junction: CLIP2.009562_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009562
Chromosome:chromosome 7
Location:4104525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342850 ODA5,DCC3 (1 of 2) PTHR21694//PTHR21694:SF18 - UNCHARACTERIZED // COILED-COIL DOMAIN-CONTAINING PROTEIN 114; Outer Arm Dynein assembly protein 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCCGCACCCTGCCTCTCCCCTAACCACCCCCCTCCCCCTGGCCCTCG
Internal bar code:CCAGCAATATTGTTAGTATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1637
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAAAACATCCCGCAAA
Suggested primer 2:TGGAGGACGTTGTGGAAGTG