Insertion junction: CLIP2.009564_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009564
Chromosome:chromosome 6
Location:2766751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271250 HTR8 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAAGACCGACCTGCGCTTCCAGAGCCAGGCCGTGCTGGCGCTGCAGG
Internal bar code:AAAAGGGCCGGTTATACCTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2469
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCACACAGGTTCTGCTG
Suggested primer 2:CTTGGTGATGCCCTGGATGT