Insertion junction: CLIP2.009565_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009565
Chromosome:contig 27
Location:11053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre27.g802186 (1 of 77) IPR029071 - Ubiquitin-related domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATAAGGTGGAGGTGGTACGGCCGCAGTCGTTGTACTATGCTGCAGAC
Internal bar code:AATATTCGCTCTTGCCCTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCATCGTCATACGGCAC
Suggested primer 2:GTGCAGCAGGTCAAAAGTGG