Insertion junction: CLIP2.009566_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009566
Chromosome:chromosome 7
Location:2737601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331250 (1 of 1) IPR008928//IPR012336 - Six-hairpin glycosidase-like // Thioredoxin-like fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCCAGATGGCGGGCGCCTATCTGGCGGCCTGGCAGCTGACGGGGGAC
Internal bar code:TCTTGACCCCGCTAGCCACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAAAGAAACCACACGCAC
Suggested primer 2:TGCAAAAGAGCGAGGAGGAG