Insertion junction: CLIP2.009569_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009569
Chromosome:chromosome 6
Location:73916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249350 DMC3,DMT1A (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Putative DNA methylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACAGGGCGTACGGTATCGCATCAACAGTTGGCATTGTACGGGTTTCG
Internal bar code:AGAGCTTGTCAGGATCAGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3316
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTTGCTTTGCGTGCTTG
Suggested primer 2:GAGGGGAGTGCAAGGATGTC