Insertion junction: CLIP2.009573_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009573
Chromosome:chromosome 16
Location:4620060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670850 (1 of 1) PTHR22975:SF2 - ECHINUS SPLICE FORM 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAACCAAATGGCCTGAGGAATGCATGTCGAGCAGCACCCTCGACAGCC
Internal bar code:GGGAAGTCCTGACATTGACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1950
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTGACTGACTGCTTGA
Suggested primer 2:GCCCGTCTCTTGATGCCTAA