Insertion junction: CLIP2.009576_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009576
Chromosome:chromosome 9
Location:2622244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801018 (1 of 1) PTHR11390//PTHR11390:SF21 - PROKARYOTIC DNA TOPOISOMERASE // DNA TOPOISOMERASE 3-ALPHA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAACTAAACCAAAACCAACGAAAACGAGGGGAGTGCAGGCAGAGGCG
Internal bar code:GTATGTCTCTCAGCCGGTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCCTCTCCCCTAAACCC
Suggested primer 2:GAGCTCGCGCATACAAAAGG