Insertion junction: CLIP2.009579_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009579
Chromosome:chromosome 6
Location:8136784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305750 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGGTGTGGGCACCGTAGGATGAGGCGGGTAGAGGGGGGCGCGATGA
Internal bar code:ACCAACATGATAGGTTTGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:396
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTTCCGCCCTCAGCTTA
Suggested primer 2:CGGTCTGAGGGAAAATGGCT