Insertion junction: CLIP2.009588_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009588
Chromosome:chromosome 16
Location:413045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693601 ISG-C2,ISG2 (1 of 5) PTHR16631//PTHR16631:SF9 - FAMILY NOT NAMED // GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCCGGATCTCAGCATGGCGACGGGCTACGTGATTCCCTCGAACAAG
Internal bar code:CCTGGCAGCGGGAGCTAGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:942
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGGAGAGTGTTGGGTG
Suggested primer 2:ATCGCTAGAGTGCTCGTTCG