Insertion junction: CLIP2.009591_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009591
Chromosome:chromosome 9
Location:1062259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401950 (1 of 8) 2.7.11.12 - cGMP-dependent protein kinase / PKG II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGCCGGCGCCGGCTGTAGCAGCATAGGCTGTAGCAGCTGGTGCGA
Internal bar code:GGATCAATAAGGTCTGTGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:417
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTGGTGGTAGTGATGG
Suggested primer 2:ATCCAAATCCAGGACTGCGG