Insertion junction: CLIP2.009600_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009600
Chromosome:chromosome 11
Location:2074346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467756 MMP5 Metalloproteinase of VMP family; (1 of 51) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATTGTGTACCAGGGTGTGTCGTGGTGGACCGCGGGAACGCCGTAATC
Internal bar code:TGGGCTCCGGTGAGTTGCCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2356
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCGTGTAGAAGGACAGT
Suggested primer 2:TGCCTCGCGTTACCGTATAC