Insertion junction: CLIP2.009604_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009604
Chromosome:chromosome 17
Location:1279945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705250 (1 of 3) IPR002889//IPR013994 - Carbohydrate-binding WSC // Carbohydrate-binding WSC, subgroup CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCTGTGAAGTGTCCAGTTTGGCCGCCGTGGTGGGCAGCGTGGTGAG
Internal bar code:GTCCAATGCTCAGCGGTGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3052
LEAP-Seq percent confirming:98.8372
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGCATTGACCTAGGTGC
Suggested primer 2:GCTCACTTCTCCACACCCTC