Insertion junction: CLIP2.009604_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009604
Chromosome:chromosome 17
Location:1279950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705250 (1 of 3) IPR002889//IPR013994 - Carbohydrate-binding WSC // Carbohydrate-binding WSC, subgroup CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAACGACAAAGGGCCGGGCTCGCTGCAGAGCGCCACGGTGTGCTGCTCG
Internal bar code:GTCCAATGCTCAGCGGTGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:441
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCACTTCTCCACACCCTC
Suggested primer 2:AAGGGCATTGACCTAGGTGC