Insertion junction: CLIP2.009613_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009613
Chromosome:chromosome 12
Location:5575633
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g531000 AMT1H,AMT8 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAATGTGGTTGCACCGGCACACGACCAATGGAAGCCCGTGTCATGTGC
Internal bar code:AAAATCACCATTGGCGGCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1397
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGTGCTGGTAGGATTGC
Suggested primer 2:ACGACGACTCATTTGGCAGT