Insertion junction: CLIP2.009615_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009615
Chromosome:chromosome 3
Location:6326316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192250 PHC69 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 69 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGCGCAGGGGACGGCGGCGACGGCGCAGGGGACGGTGGCAACGGTGG
Internal bar code:GTCCGTCTTGTTTACTGACCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1776
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTACGGCGCTCATGACTG
Suggested primer 2:CACAACATAGGCCACACCCT