Insertion junction: CLIP2.009620_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009620
Chromosome:chromosome 3
Location:254544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144344 (1 of 1) IPR003613//IPR011009//IPR013083//IPR013320 - U box domain // Protein kinase-like domain // Zinc finger, RING/FYVE/PHD-type // Concanavalin A-like lectin/glucanase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGTTGCGGTACACCGTGGTGTGAGGGATGCTGCTCCAACCCGCCGCC
Internal bar code:CGGACACGTCGTCGCAACATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:11.3924
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTGCACACTGTTGGCAT
Suggested primer 2:TGTAGGAGAGGACGGGAAGG