Insertion junction: CLIP2.009622_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009622
Chromosome:chromosome 6
Location:3992631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278208 (1 of 1) PF04845 - PurA ssDNA and RNA-binding protein (PurA) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGCGCGGCGGCGCCATCATGGCGATGCTGATTGCCTCCTGGAACTG
Internal bar code:AAATATAAACTGATGAGCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGCGCGATAGACAGACC
Suggested primer 2:TTCCCAATTCCGGATGAGGC