Insertion junction: CLIP2.009624_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009624
Chromosome:chromosome 12
Location:4952195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524550 (1 of 2) PTHR14614//PTHR14614:SF3 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACCCAGGCCCGCGCCACGCAGCATTCATGTCCGCCCAAGTGGATTGGA
Internal bar code:GCCAGGGTTGTATGAACATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTGCGTACCGATACATC
Suggested primer 2:TCTGTCAACCGTCTTCCTGC