Insertion junction: CLIP2.009627_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009627
Chromosome:chromosome 3
Location:2946645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162900 (1 of 3) PTHR11017//PTHR11017:SF145//PTHR12203//PTHR12203:SF13 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED // KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // F10K1.7 PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGATGGCTAGGCCAAGCGTCAGCGCCCGAGAGGCAGATGAGGACGA
Internal bar code:GAGCATCTCTAGAGTATTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1951
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGATTCGGCTCACCACC
Suggested primer 2:GCTTTGTTTCCACCGCCAAT