Insertion junction: CLIP2.009637_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009637
Chromosome:chromosome 3
Location:5118963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180650 DEG7 (1 of 2) PTHR22939//PTHR22939:SF66 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PRO-APOPTOTIC SERINE PROTEASE NMA111; Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCACCGCGCCGCGCAGGGCCGCGCCAACGTGCCCAAATGCGCCATTAT
Internal bar code:CTACTGAATTTGTGAATATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2362
LEAP-Seq percent confirming:67.6056
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGTCCCGCGTCCAGTAC
Suggested primer 2:TGTGGGAAATCGGGAAGTGG