Insertion junction: CLIP2.009642_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.009642
Chromosome:chromosome 11
Location:3593015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478100 (1 of 7) PF12680 - SnoaL-like domain (SnoaL_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTATGCATTACCTGTATGTGGTCTTACGTAAGGTGCTCCAAGAGTAA
Internal bar code:GGTAAACCTGACTGTCTTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:589
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCACACTCGTTTTAGCT
Suggested primer 2:CATGGAATCCGCGCGAAAAT