Insertion junction: CLIP2.009648_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009648
Chromosome:chromosome 1
Location:5161796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036050 MLH1 DNA mismatch repair protein; (1 of 1) K08734 - DNA mismatch repair protein MLH1 (MLH1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGACGCCACACTGCCCCGATGCGCGCTGCACATATACAACACTGGAAC
Internal bar code:TTGGTATGTCCAACGGATTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:983
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTTGGCTGGAGGATCTT
Suggested primer 2:TCAACGCACCTGTAGTCCAC