Insertion junction: CLIP2.009654_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009654
Chromosome:chromosome 17
Location:2277554
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGCGCCTGAGCTACTCCATGCAAACGCCAGGGGGGGGGGTAGGAAC
Internal bar code:CGTAGGGCCAATGCTGCAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTTGGGAGATGCCTGGGG
Suggested primer 2:GCTGGGCTCGTATGTAGTCC