Insertion junction: CLIP2.009656_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009656
Chromosome:chromosome 10
Location:403642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420551 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACAGGAGGAGCCGCAGCCACAGGCGCTTGCGGCTGAAGAGGTGGTTGC
Internal bar code:CCTCCTCGTGTGGGATGTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3059
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAAGCAAGTGGACGTGA
Suggested primer 2:AGAGCTCCGGCAATGCTATC