Insertion junction: CLIP2.009665_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009665
Chromosome:chromosome 3
Location:5541762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185150 (1 of 11) IPR023109 - Integrase/recombinase, N-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTGCCGCCTGCCCGCTGTCCTTCGTTCTAACAGCGCGCCTTCCAGGA
Internal bar code:GGTCGATAAGTGCAAACGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2993
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAAGCAGTCCACAATGC
Suggested primer 2:TGTTGGACTTCGTACTGCCC