Insertion junction: CLIP2.009668_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009668
Chromosome:chromosome 17
Location:5468498
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739050 (1 of 230) IPR017986 - WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTTGGGATCCGGAGCAATCTGCATGCGTGCAGGCTCCAGCTCATCTT
Internal bar code:TGGCCCAGTGGAGTGTACTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1952
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGGCTGCTGTTGAGGAA
Suggested primer 2:TGCAATTGAGTGGCATTGGC