Insertion junction: CLIP2.009669_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009669
Chromosome:chromosome 17
Location:3632584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725376 (1 of 1) IPR000104//IPR001859//IPR009148 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like // Streptococcal non-M secreted SibA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGAAGTGGGAATTTAGGAAGGTTTCGCGCGCGAGGGTCCGGTAGCA
Internal bar code:GTCTTCGTCTAATCTTGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1279
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTAGTTCGGGTCTTTGCT
Suggested primer 2:GTTGCATTCCCTGGAGAGCT