Insertion junction: CLIP2.009670_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009670
Chromosome:chromosome 9
Location:5787371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411150 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGACCGTGGCCGTGCCGCTCGCCGCGGGTCCCGTGCTTGCCCGCCGCC
Internal bar code:CGATGCGACTCGTGAAGAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:795
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGCTAGGACCTGGACTC
Suggested primer 2:GGTGCAGTCTGGCAAGTACT