Insertion junction: CLIP2.009670_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009670
Chromosome:chromosome 9
Location:5787372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411150 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCAGGAGCACGGGCAGGGGCAGGGGCGTGGGGACGCAGGTGAGCCGCA
Internal bar code:CGATGCGACTCGTGAAGAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:241
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCAGTCTGGCAAGTACT
Suggested primer 2:TGGAGCTAGGACCTGGACTC