Insertion junction: CLIP2.009672_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009672
Chromosome:chromosome 6
Location:2409682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268650 FAP279 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9); Flagellar Associated Protein 279 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAGCAGCGCGGGCAAGGCTGCCAGGGTGGTCTTCATTGTCTTTACCC
Internal bar code:AGTAACAGTTGAGTGGGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:6786
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGTGAGCGAACCCCACAA
Suggested primer 2:GCATGCGCATGAACAGGTAG