Insertion junction: CLIP2.009681_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.009681
Chromosome:chromosome 8
Location:3917527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382100 (1 of 4) PTHR11584//PTHR11584:SF377 - SERINE/THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCCAGAGCCATGACGGCGGTGCTGGCGCCCGACATTGAAGCCTGTG
Internal bar code:TCAAAGGATTCTAAGGGTGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1414
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTCTTGGCTTCTTGCGC
Suggested primer 2:CTGCCCGCTTTGAACATAGC