Insertion junction: CLIP2.009706_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009706
Chromosome:chromosome 17
Location:2136527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711950 PFP1 Prefoldin-family protein; (1 of 1) PTHR13345//PTHR13345:SF4 - NUT2 AND UXT // PROTEIN UXT intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGTCCGTCCAACTCACCCGAGTCCTCTTGCAGCTTCGCCCTCCGCT
Internal bar code:TGAGAAGGGCGTTGTAATGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2266
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCCTTAGCCTGCCGAAG
Suggested primer 2:AATGCGGTTAGGAGGGGTTG