Insertion junction: CLIP2.009709_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009709
Chromosome:chromosome 16
Location:597154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692200 MMP6 (1 of 1) IPR003609//IPR008752 - PAN/Apple domain // Peptidase M11, gametolysin; Metalloproteinase of VMP family CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACGGAGCGCCAGATACACGTTCCTGCGGGCGAGGGCGAGGGCGAGGT
Internal bar code:CGTCAGAACTGGAGAGGTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2037
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCGGTTTATGAGCAGC
Suggested primer 2:CTTGACAGAGTAGCGGCACA