Insertion junction: CLIP2.009722_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009722
Chromosome:chromosome 5
Location:1256252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241637 FAP32,IFT46 Intraflagellar transport protein 46; (1 of 1) PTHR13376//PTHR13376:SF0 - UNCHARACTERIZED // INTRAFLAGELLAR TRANSPORT PROTEIN 46 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACTGGCCCTGTCCTGACCCTGACTCTGGCGGCAGGACCTCAAAGCTG
Internal bar code:TCGCCATTACCTTTCGTAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2403
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AATAGTGCCGTGAGCCACAA
Suggested primer 2:GAGCGGGTGGGAGAAGAAAA