Insertion junction: CLIP2.009730_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009730
Chromosome:chromosome 11
Location:1962813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467776 (1 of 88) IPR011333 - POZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAGTCCGCGCAGAACGTGCTGCACCTGGCGTCCCTGGCCAACAGGTG
Internal bar code:GGATCCGGGTAGAACCCCCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:669
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCGCATCCTGCATAC
Suggested primer 2:CGGGTGATGAGTGGGATACG