Insertion junction: CLIP2.009746_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009746
Chromosome:chromosome 4
Location:3916517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230830 (1 of 1) IPR000104//IPR001012//IPR029071 - Antifreeze protein, type I // UBX domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATTTCATCCGGGCGGCTACGCGCGGTGGCCGCCTGCCTGTGTCACGTT
Internal bar code:GCGACGTTTTTAGAGGAGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1777
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACTGTACACGACTGGA
Suggested primer 2:CAAGCGGATCGTGTTGTGTG