Insertion junction: CLIP2.009769_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.009769
Chromosome:chromosome 16
Location:4866583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687117 (1 of 2) PF14249 - Tocopherol cyclase (Tocopherol_cycl) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGTGCGCAGAGCGCACGTGCATTGGAGCCCCGCCGCCGTTCAGACAC
Internal bar code:ATGCTAGAATTTGGGAATGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2893
LEAP-Seq percent confirming:98.7654
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGGAAGTCCCAACGCAG
Suggested primer 2:AAGCTGACCTGCCCATCTTC