Insertion junction: CLIP2.009769_5

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.009769
Chromosome:chromosome 16
Location:4866614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687117 (1 of 2) PF14249 - Tocopherol cyclase (Tocopherol_cycl) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCCTGTGGCCGCACTGTCCCCACACTGGCCGCACTGTCCCCACAGG
Internal bar code:TTACTCATACCCATAAATACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2353
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGACCTGCCCATCTTC
Suggested primer 2:ATCTGGAAGTCCCAACGCAG