Insertion junction: CLIP2.009771_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.009771
Chromosome:chromosome 9
Location:3584484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396698 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCAAGCACCAGGCCGCCGCCGCCGCAGCCAAGTCTGCGGTGCTGCC
Internal bar code:GCGTAAGACATATGTGCCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:766
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AACATGACAGCGCTCCTCAA
Suggested primer 2:ACGGAACTCTCTGCCTACCT