Insertion junction: CLIP2.009777_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009777
Chromosome:chromosome 16
Location:5435087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682600 (1 of 1) PTHR24079//PTHR24079:SF0 - FAMILY NOT NAMED // KNIRPS-RELATED PROTEIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCCGCCGCCGGAGAGGGTACCTGCAAGCAGAGAACTGCGGTCTTCGT
Internal bar code:TTTCACGTAGCCGCTAGCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2339
LEAP-Seq percent confirming:1.63934
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGAGTGTCAGAGGCTT
Suggested primer 2:GATTGACCCCGAGGATGACC