Insertion junction: CLIP2.009789_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.009789
Chromosome:chromosome 13
Location:2643288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581200 (1 of 1) PTHR12241//PTHR12241:SF1 - TUBULIN TYROSINE LIGASE-RELATED // TUBULIN--TYROSINE LIGASE PBY1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGGCATATGCAAAACGTGCGGGCCGCCTTGGAGCCTCGTCTGGGCG
Internal bar code:GGCACGGAATTAAGCTTCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2923
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAACCCAAGCCTCTTCCG
Suggested primer 2:AATGGCCCACGAGCATAACA