Insertion junction: CLIP2.009790_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.009790
Chromosome:chromosome 7
Location:1857497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325738 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAACGTAGATAGGGGCATGCATGCTGTGCGGGGCGCAGCGGCAGGATGC
Internal bar code:GCTAAGGCAAAGTGGATTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1200
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTCAAGGCCGTTCTTTG
Suggested primer 2:AGACCGTGAGAAGCTTGCTC